Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 AC115891.3-201ENSMUST00000219161 2472 ntBASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Gm16387-201ENSMUST00000180990 2632 ntBASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Smco4Q9JIS3 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Ccdc186-202ENSMUST00000118592 6445 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 AW822252-206ENSMUST00000208904 237 ntBASIC9.28□□□□□ -0.92
Smco4Q9JIS3 AC166051.1-201ENSMUST00000214313 210 ntBASIC9.28□□□□□ -0.92
Smco4Q9JIS3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 AC165157.4-201ENSMUST00000220587 139 ntBASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Loxl4-201ENSMUST00000026190 3738 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Ablim1-212ENSMUST00000111558 3123 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 N6amt1-204ENSMUST00000120284 3473 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Gm43086-201ENSMUST00000202536 2657 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Gm15897-201ENSMUST00000117770 1486 ntBASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Smco4Q9JIS3 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Smco4Q9JIS3 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Smco4Q9JIS3 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Smco4Q9JIS3 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Smco4Q9JIS3 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 R3hdm2-218ENSMUST00000170336 3639 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Gm12539-201ENSMUST00000121549 1098 ntBASIC9.27□□□□□ -0.93
Smco4Q9JIS3 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC9.27□□□□□ -0.93
Smco4Q9JIS3 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Gm44335-201ENSMUST00000196879 141 ntBASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Gm44346-201ENSMUST00000198851 141 ntBASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 AC153974.2-201ENSMUST00000218577 1025 ntBASIC9.27□□□□□ -0.93
Smco4Q9JIS3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Gm15500-202ENSMUST00000071641 1019 ntBASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Anapc15-213ENSMUST00000178851 2797 ntTSL 2 BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Smco4Q9JIS3 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms