Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 Gm25881-201ENSMUST00000157783 103 ntBASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 Gm2260-201ENSMUST00000184965 657 ntBASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 Gm8420-201ENSMUST00000097103 598 ntBASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ddx56Q9D0R4 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC12.27□□□□□ -0.44
Ddx56Q9D0R4 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Ddx56Q9D0R4 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Ddx56Q9D0R4 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ddx56Q9D0R4 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ddx56Q9D0R4 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.27□□□□□ -0.44
Ddx56Q9D0R4 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ddx56Q9D0R4 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ddx56Q9D0R4 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ddx56Q9D0R4 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.27□□□□□ -0.44
Ddx56Q9D0R4 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ddx56Q9D0R4 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ddx56Q9D0R4 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Gm43221-201ENSMUST00000197612 2071 ntBASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Gm26047-201ENSMUST00000157308 113 ntBASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Gm16505-201ENSMUST00000179981 232 ntBASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Gm27530-201ENSMUST00000184096 98 ntBASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Gm2965-201ENSMUST00000198365 343 ntBASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Gm26047-202ENSMUST00000198840 115 ntBASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ddx56Q9D0R4 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx56Q9D0R4 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.26□□□□□ -0.45
Ddx56Q9D0R4 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx56Q9D0R4 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx56Q9D0R4 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx56Q9D0R4 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.26□□□□□ -0.45
Ddx56Q9D0R4 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Ddx56Q9D0R4 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx56Q9D0R4 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx56Q9D0R4 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ddx56Q9D0R4 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx56Q9D0R4 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx56Q9D0R4 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx56Q9D0R4 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx56Q9D0R4 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx56Q9D0R4 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx56Q9D0R4 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ddx56Q9D0R4 Gm11500-201ENSMUST00000118237 601 ntBASIC12.26□□□□□ -0.45
Ddx56Q9D0R4 Gm11783-201ENSMUST00000119549 885 ntBASIC12.26□□□□□ -0.45
Ddx56Q9D0R4 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.26□□□□□ -0.45
Ddx56Q9D0R4 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms