Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm7Q9CQQ8 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm7Q9CQQ8 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm7Q9CQQ8 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm7Q9CQQ8 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Lsm7Q9CQQ8 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm7Q9CQQ8 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm7Q9CQQ8 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Lsm7Q9CQQ8 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm7Q9CQQ8 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm7Q9CQQ8 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lsm7Q9CQQ8 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Lsm7Q9CQQ8 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Lsm7Q9CQQ8 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lsm7Q9CQQ8 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lsm7Q9CQQ8 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.77□□□□□ -0.52
Lsm7Q9CQQ8 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lsm7Q9CQQ8 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lsm7Q9CQQ8 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lsm7Q9CQQ8 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.77□□□□□ -0.52
Lsm7Q9CQQ8 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lsm7Q9CQQ8 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Lsm7Q9CQQ8 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lsm7Q9CQQ8 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Gm11667-201ENSMUST00000119828 486 ntBASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Gm23771-201ENSMUST00000178702 110 ntBASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Gm27910-201ENSMUST00000185004 107 ntBASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Gm3551-201ENSMUST00000190750 664 ntBASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Gm37981-201ENSMUST00000194280 535 ntBASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Gm8342-201ENSMUST00000209839 757 ntBASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lsm7Q9CQQ8 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Gm7741-201ENSMUST00000181445 989 ntBASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Gm44980-201ENSMUST00000205826 314 ntBASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Gm44545-201ENSMUST00000208262 746 ntBASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm7Q9CQQ8 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms