Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm37666-201ENSMUST00000194110 866 ntBASIC11.7□□□□□ -0.54
Trim33Q99PP7 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim33Q99PP7 AY036118-201ENSMUST00000200021 923 ntBASIC11.7□□□□□ -0.54
Trim33Q99PP7 AU022133-201ENSMUST00000200601 873 ntBASIC11.7□□□□□ -0.54
Trim33Q99PP7 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim33Q99PP7 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.7□□□□□ -0.54
Trim33Q99PP7 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Olfr23-202ENSMUST00000214210 2527 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim33Q99PP7 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim33Q99PP7 M1ap-201ENSMUST00000113980 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim33Q99PP7 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.7□□□□□ -0.54
Trim33Q99PP7 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim33Q99PP7 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.69□□□□□ -0.54
Trim33Q99PP7 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.69□□□□□ -0.54
Trim33Q99PP7 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.69□□□□□ -0.54
Trim33Q99PP7 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.69□□□□□ -0.54
Trim33Q99PP7 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.69□□□□□ -0.54
Trim33Q99PP7 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Gm14208-201ENSMUST00000119645 678 ntBASIC11.69□□□□□ -0.54
Trim33Q99PP7 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.69□□□□□ -0.54
Trim33Q99PP7 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Trim33Q99PP7 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC11.69□□□□□ -0.54
Trim33Q99PP7 Gm8956-201ENSMUST00000203939 825 ntBASIC11.69□□□□□ -0.54
Trim33Q99PP7 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim33Q99PP7 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.69□□□□□ -0.54
Trim33Q99PP7 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim33Q99PP7 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.69□□□□□ -0.54
Trim33Q99PP7 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Gm8385-201ENSMUST00000058999 643 ntBASIC11.69□□□□□ -0.54
Trim33Q99PP7 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.69□□□□□ -0.54
Trim33Q99PP7 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Trim33Q99PP7 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.68□□□□□ -0.54
Trim33Q99PP7 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.68□□□□□ -0.54
Trim33Q99PP7 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.68□□□□□ -0.54
Trim33Q99PP7 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Gm14017-201ENSMUST00000121934 386 ntBASIC11.68□□□□□ -0.54
Trim33Q99PP7 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim33Q99PP7 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.68□□□□□ -0.54
Trim33Q99PP7 Gm18056-201ENSMUST00000207670 568 ntBASIC11.68□□□□□ -0.54
Trim33Q99PP7 Gm18061-201ENSMUST00000208350 562 ntBASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 105.1 ms