Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Gm8420-201ENSMUST00000097103 598 ntBASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trim8Q99PJ2 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim8Q99PJ2 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.46□□□□□ -0.58
Trim8Q99PJ2 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trim8Q99PJ2 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim8Q99PJ2 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trim8Q99PJ2 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trim8Q99PJ2 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim8Q99PJ2 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim8Q99PJ2 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim8Q99PJ2 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trim8Q99PJ2 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.46□□□□□ -0.58
Trim8Q99PJ2 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trim8Q99PJ2 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Trim8Q99PJ2 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Trim8Q99PJ2 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim8Q99PJ2 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trim8Q99PJ2 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Mir1247-201ENSMUST00000116706 82 ntBASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Gm27516-201ENSMUST00000184237 98 ntBASIC11.45□□□□□ -0.58
Trim8Q99PJ2 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.45□□□□□ -0.58
Trim8Q99PJ2 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Lect2-202ENSMUST00000225183 823 ntBASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim8Q99PJ2 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Gm10434-201ENSMUST00000101158 471 ntBASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Gm11700-201ENSMUST00000119409 403 ntBASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Gm27501-201ENSMUST00000183599 107 ntBASIC11.44□□□□□ -0.58
Trim8Q99PJ2 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim8Q99PJ2 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms