Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Gm6334-201ENSMUST00000207083 228 ntBASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cdk5rap3Q99LM2 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Erich3-203ENSMUST00000189969 3460 ntBASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Mir7085-201ENSMUST00000184353 66 ntBASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Gm2553-201ENSMUST00000215986 605 ntBASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Gm807-202ENSMUST00000224929 408 ntBASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Gm5705-201ENSMUST00000066241 711 ntBASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.06□□□□□ -0.48
Cdk5rap3Q99LM2 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms