Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Gm23085-201ENSMUST00000157849 293 ntBASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Gm34023-201ENSMUST00000195539 217 ntBASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Gm4482-201ENSMUST00000200876 742 ntBASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Gm6450-201ENSMUST00000200896 574 ntBASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Gm5298-201ENSMUST00000201122 892 ntBASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Gm9463-201ENSMUST00000206707 601 ntBASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Gm270-201ENSMUST00000223010 976 ntBASIC12.08□□□□□ -0.48
Ddx1Q91VR5 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.08□□□□□ -0.48
Ddx1Q91VR5 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx1Q91VR5 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ddx1Q91VR5 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Gm22138-201ENSMUST00000158748 128 ntBASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Gm27530-201ENSMUST00000184096 98 ntBASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Gm28937-201ENSMUST00000185413 695 ntBASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Gm29400-201ENSMUST00000187208 695 ntBASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Gm28662-201ENSMUST00000188446 695 ntBASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Gm28251-201ENSMUST00000188835 695 ntBASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Gm37318-201ENSMUST00000194325 695 ntBASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Gm38117-201ENSMUST00000194653 939 ntBASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Gm38017-201ENSMUST00000194768 695 ntBASIC12.07□□□□□ -0.48
Ddx1Q91VR5 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Gm37287-201ENSMUST00000195449 695 ntBASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Gm37793-201ENSMUST00000195548 695 ntBASIC12.07□□□□□ -0.48
Ddx1Q91VR5 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.07□□□□□ -0.48
Ddx1Q91VR5 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ddx1Q91VR5 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.06□□□□□ -0.48
Ddx1Q91VR5 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Ddx1Q91VR5 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx1Q91VR5 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx1Q91VR5 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx1Q91VR5 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx1Q91VR5 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx1Q91VR5 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.06□□□□□ -0.48
Ddx1Q91VR5 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx1Q91VR5 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx1Q91VR5 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx1Q91VR5 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ddx1Q91VR5 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ddx1Q91VR5 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ddx1Q91VR5 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx1Q91VR5 Gm7851-201ENSMUST00000117574 323 ntBASIC12.06□□□□□ -0.48
Ddx1Q91VR5 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.06□□□□□ -0.48
Ddx1Q91VR5 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx1Q91VR5 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx1Q91VR5 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ddx1Q91VR5 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.06□□□□□ -0.48
Ddx1Q91VR5 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.06□□□□□ -0.48
Ddx1Q91VR5 Gm43184-201ENSMUST00000197247 542 ntBASIC12.06□□□□□ -0.48
Ddx1Q91VR5 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ddx1Q91VR5 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.06□□□□□ -0.48
Ddx1Q91VR5 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms