Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Gm23251-201ENSMUST00000103773 110 ntBASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Gm14071-201ENSMUST00000117817 509 ntBASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Gm11941-201ENSMUST00000119904 610 ntBASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Gm15595-201ENSMUST00000120840 961 ntBASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Gm8459-201ENSMUST00000162504 760 ntBASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Gm6548-201ENSMUST00000167498 1165 ntBASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 CT009713.8-202ENSMUST00000224732 385 ntBASIC14.06□□□□□ -0.16
Brf1Q8CFK2 AC112945.1-201ENSMUST00000226413 514 ntBASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Brf1Q8CFK2 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Gm37466-201ENSMUST00000195692 652 ntBASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Gm1821-202ENSMUST00000227415 750 ntBASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Gm44755-201ENSMUST00000207830 2102 ntBASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brf1Q8CFK2 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brf1Q8CFK2 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Brf1Q8CFK2 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Brf1Q8CFK2 Gm17230-201ENSMUST00000171194 3942 ntBASIC14.04□□□□□ -0.16
Brf1Q8CFK2 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brf1Q8CFK2 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Brf1Q8CFK2 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brf1Q8CFK2 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Brf1Q8CFK2 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brf1Q8CFK2 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Brf1Q8CFK2 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC14.04□□□□□ -0.16
Brf1Q8CFK2 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brf1Q8CFK2 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brf1Q8CFK2 Gm13809-201ENSMUST00000117921 597 ntBASIC14.04□□□□□ -0.16
Brf1Q8CFK2 Gm8731-201ENSMUST00000118088 412 ntBASIC14.04□□□□□ -0.16
Brf1Q8CFK2 Gm11500-201ENSMUST00000118237 601 ntBASIC14.04□□□□□ -0.16
Brf1Q8CFK2 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.04□□□□□ -0.16
Brf1Q8CFK2 Gm15566-201ENSMUST00000121130 590 ntBASIC14.04□□□□□ -0.16
Brf1Q8CFK2 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC14.04□□□□□ -0.16
Brf1Q8CFK2 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brf1Q8CFK2 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Brf1Q8CFK2 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.04□□□□□ -0.16
Brf1Q8CFK2 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Brf1Q8CFK2 AC134860.1-201ENSMUST00000224867 660 ntBASIC14.04□□□□□ -0.16
Brf1Q8CFK2 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brf1Q8CFK2 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Brf1Q8CFK2 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms