Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Gm13408-201ENSMUST00000119822 798 ntBASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Gm14247-201ENSMUST00000120950 237 ntBASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Gm13935-201ENSMUST00000121859 798 ntBASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Gm7467-201ENSMUST00000185173 652 ntBASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Gm18711-201ENSMUST00000199341 750 ntBASIC13.78□□□□□ -0.2
Nup88Q8CEC0 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Nup88Q8CEC0 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nup88Q8CEC0 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nup88Q8CEC0 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC13.77□□□□□ -0.2
Nup88Q8CEC0 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nup88Q8CEC0 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nup88Q8CEC0 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nup88Q8CEC0 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Nup88Q8CEC0 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Gm11941-201ENSMUST00000119904 610 ntBASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Rprl1-201ENSMUST00000158050 327 ntBASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Gm38055-201ENSMUST00000195353 2217 ntBASIC13.77□□□□□ -0.21
Nup88Q8CEC0 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Gm17931-201ENSMUST00000208132 634 ntBASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.77□□□□□ -0.21
Nup88Q8CEC0 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nup88Q8CEC0 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Nup88Q8CEC0 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup88Q8CEC0 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup88Q8CEC0 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup88Q8CEC0 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup88Q8CEC0 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup88Q8CEC0 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup88Q8CEC0 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC13.76□□□□□ -0.21
Nup88Q8CEC0 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup88Q8CEC0 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup88Q8CEC0 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nup88Q8CEC0 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.76□□□□□ -0.21
Nup88Q8CEC0 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup88Q8CEC0 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nup88Q8CEC0 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Nup88Q8CEC0 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 213 ms