Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usp44Q8C2S0 Gm7395-201ENSMUST00000216059 1045 ntBASIC13.62□□□□□ -0.23
Usp44Q8C2S0 AC122891.1-201ENSMUST00000218671 268 ntBASIC13.62□□□□□ -0.23
Usp44Q8C2S0 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp44Q8C2S0 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp44Q8C2S0 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usp44Q8C2S0 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Usp44Q8C2S0 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp44Q8C2S0 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usp44Q8C2S0 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Usp44Q8C2S0 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp44Q8C2S0 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp44Q8C2S0 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Usp44Q8C2S0 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp44Q8C2S0 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp44Q8C2S0 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC13.62□□□□□ -0.23
Usp44Q8C2S0 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Usp44Q8C2S0 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp44Q8C2S0 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Usp44Q8C2S0 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Gm17230-201ENSMUST00000171194 3942 ntBASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Gm43127-201ENSMUST00000195890 2789 ntBASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Gm37849-201ENSMUST00000194722 1881 ntBASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 B9d1os-201ENSMUST00000137010 674 ntBASIC13.61□□□□□ -0.23
Usp44Q8C2S0 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Gm7504-201ENSMUST00000201449 424 ntBASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Usp44Q8C2S0 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Gm2128-201ENSMUST00000108009 2560 ntBASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp44Q8C2S0 n-R5s64-201ENSMUST00000102019 119 ntBASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Gm25148-201ENSMUST00000104611 123 ntBASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Gm12566-201ENSMUST00000121479 359 ntBASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Gm5342-201ENSMUST00000181982 1003 ntBASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Usp44Q8C2S0 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Mir7686-201ENSMUST00000200604 57 ntBASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Gm17825-201ENSMUST00000206836 794 ntBASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Btrc-209ENSMUST00000224478 2194 ntBASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Spcs1-203ENSMUST00000226374 592 ntBASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Olfr584-201ENSMUST00000098210 964 ntBASIC13.6□□□□□ -0.23
Usp44Q8C2S0 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms