Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Gm17040-202ENSMUST00000170597 889 ntBASIC12.01□□□□□ -0.49
Trub1Q8C0D0 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Gm38151-201ENSMUST00000195085 289 ntBASIC12.01□□□□□ -0.49
Trub1Q8C0D0 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Gm9257-201ENSMUST00000221254 232 ntBASIC12.01□□□□□ -0.49
Trub1Q8C0D0 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.01□□□□□ -0.49
Trub1Q8C0D0 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.01□□□□□ -0.49
Trub1Q8C0D0 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trub1Q8C0D0 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trub1Q8C0D0 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trub1Q8C0D0 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trub1Q8C0D0 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trub1Q8C0D0 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trub1Q8C0D0 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trub1Q8C0D0 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trub1Q8C0D0 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trub1Q8C0D0 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trub1Q8C0D0 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trub1Q8C0D0 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trub1Q8C0D0 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trub1Q8C0D0 Gm15515-201ENSMUST00000117827 822 ntBASIC12□□□□□ -0.49
Trub1Q8C0D0 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12□□□□□ -0.49
Trub1Q8C0D0 Gm11439-201ENSMUST00000118598 409 ntBASIC12□□□□□ -0.49
Trub1Q8C0D0 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12□□□□□ -0.49
Trub1Q8C0D0 Gm12266-201ENSMUST00000120311 962 ntBASIC12□□□□□ -0.49
Trub1Q8C0D0 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trub1Q8C0D0 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trub1Q8C0D0 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12□□□□□ -0.49
Trub1Q8C0D0 Gm18734-201ENSMUST00000172937 808 ntBASIC12□□□□□ -0.49
Trub1Q8C0D0 Gm27552-201ENSMUST00000183351 62 ntBASIC12□□□□□ -0.49
Trub1Q8C0D0 Gm27844-201ENSMUST00000183613 62 ntBASIC12□□□□□ -0.49
Trub1Q8C0D0 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12□□□□□ -0.49
Trub1Q8C0D0 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12□□□□□ -0.49
Trub1Q8C0D0 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12□□□□□ -0.49
Trub1Q8C0D0 Gm9176-201ENSMUST00000219955 1120 ntBASIC12□□□□□ -0.49
Trub1Q8C0D0 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trub1Q8C0D0 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trub1Q8C0D0 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trub1Q8C0D0 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trub1Q8C0D0 Gm10288-201ENSMUST00000084614 537 ntBASIC12□□□□□ -0.49
Trub1Q8C0D0 Gm21811-201ENSMUST00000096485 930 ntBASIC12□□□□□ -0.49
Trub1Q8C0D0 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trub1Q8C0D0 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trub1Q8C0D0 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trub1Q8C0D0 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trub1Q8C0D0 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trub1Q8C0D0 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trub1Q8C0D0 Gm37122-201ENSMUST00000195313 1567 ntBASIC12□□□□□ -0.49
Trub1Q8C0D0 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trub1Q8C0D0 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trub1Q8C0D0 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12□□□□□ -0.49
Trub1Q8C0D0 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12□□□□□ -0.49
Trub1Q8C0D0 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Gm12501-201ENSMUST00000119163 529 ntBASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Gm14277-201ENSMUST00000121195 360 ntBASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Gm26047-201ENSMUST00000157308 113 ntBASIC11.99□□□□□ -0.49
Trub1Q8C0D0 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms