Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gm22877-201ENSMUST00000175451 105 ntBASIC12.8□□□□□ -0.36
Ush1gQ80T11 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1gQ80T11 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.8□□□□□ -0.36
Ush1gQ80T11 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.8□□□□□ -0.36
Ush1gQ80T11 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Ush1gQ80T11 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.79□□□□□ -0.36
Ush1gQ80T11 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.79□□□□□ -0.36
Ush1gQ80T11 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1gQ80T11 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Gm6108-201ENSMUST00000208365 367 ntBASIC12.79□□□□□ -0.36
Ush1gQ80T11 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.79□□□□□ -0.36
Ush1gQ80T11 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.79□□□□□ -0.36
Ush1gQ80T11 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.79□□□□□ -0.36
Ush1gQ80T11 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ush1gQ80T11 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.79□□□□□ -0.36
Ush1gQ80T11 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.79□□□□□ -0.36
Ush1gQ80T11 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ush1gQ80T11 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1gQ80T11 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Gm13668-201ENSMUST00000119237 1001 ntBASIC12.78□□□□□ -0.36
Ush1gQ80T11 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Gm4310-201ENSMUST00000177847 889 ntBASIC12.78□□□□□ -0.36
Ush1gQ80T11 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Gm42657-201ENSMUST00000201746 211 ntBASIC12.78□□□□□ -0.36
Ush1gQ80T11 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ush1gQ80T11 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.78□□□□□ -0.36
Ush1gQ80T11 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1gQ80T11 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.78□□□□□ -0.36
Ush1gQ80T11 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Gm25517-201ENSMUST00000083865 134 ntBASIC12.78□□□□□ -0.36
Ush1gQ80T11 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1gQ80T11 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ush1gQ80T11 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms