Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Scaf4Q6PFF0 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Gm13297-201ENSMUST00000120205 934 ntBASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Scaf4Q6PFF0 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Gm23931-201ENSMUST00000103842 109 ntBASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Gm12015-201ENSMUST00000117065 843 ntBASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Gm13226-201ENSMUST00000117838 404 ntBASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Gm11511-201ENSMUST00000118146 540 ntBASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Gm15004-201ENSMUST00000119192 630 ntBASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Gm18187-201ENSMUST00000196476 984 ntBASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Gm43133-201ENSMUST00000197472 463 ntBASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Gm43966-201ENSMUST00000203301 612 ntBASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Gm8956-201ENSMUST00000203939 825 ntBASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.47□□□□□ -0.57
Scaf4Q6PFF0 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms