Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup98Q6PFD9 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.52□□□□□ -0.24
Nup98Q6PFD9 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup98Q6PFD9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup98Q6PFD9 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup98Q6PFD9 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup98Q6PFD9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Nup98Q6PFD9 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC13.52□□□□□ -0.24
Nup98Q6PFD9 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nup98Q6PFD9 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Nup98Q6PFD9 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup98Q6PFD9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup98Q6PFD9 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup98Q6PFD9 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nup98Q6PFD9 Gm42815-201ENSMUST00000198787 1470 ntBASIC13.52□□□□□ -0.24
Nup98Q6PFD9 Gm5641-201ENSMUST00000091130 1488 ntBASIC13.52□□□□□ -0.24
Nup98Q6PFD9 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nup98Q6PFD9 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup98Q6PFD9 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Mir453-201ENSMUST00000104732 82 ntBASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Gm16165-201ENSMUST00000160140 795 ntBASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC13.52□□□□□ -0.25
Nup98Q6PFD9 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Gm25201-201ENSMUST00000083093 170 ntBASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup98Q6PFD9 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.52□□□□□ -0.25
Nup98Q6PFD9 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Gm11560-201ENSMUST00000117567 948 ntBASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Gm4862-201ENSMUST00000170405 438 ntBASIC13.51□□□□□ -0.25
Nup98Q6PFD9 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Gm5298-201ENSMUST00000201122 892 ntBASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup98Q6PFD9 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.5□□□□□ -0.25
Nup98Q6PFD9 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup98Q6PFD9 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC13.5□□□□□ -0.25
Nup98Q6PFD9 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC13.5□□□□□ -0.25
Nup98Q6PFD9 Gm7719-201ENSMUST00000182374 975 ntBASIC13.5□□□□□ -0.25
Nup98Q6PFD9 Gm26989-201ENSMUST00000182608 749 ntBASIC13.5□□□□□ -0.25
Nup98Q6PFD9 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC13.5□□□□□ -0.25
Nup98Q6PFD9 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC13.5□□□□□ -0.25
Nup98Q6PFD9 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Nup98Q6PFD9 Gm42430-201ENSMUST00000197209 616 ntBASIC13.5□□□□□ -0.25
Nup98Q6PFD9 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC13.5□□□□□ -0.25
Nup98Q6PFD9 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nup98Q6PFD9 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup98Q6PFD9 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms