Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smarcc2Q6PDG5 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Gm28937-201ENSMUST00000185413 695 ntBASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Gm29400-201ENSMUST00000187208 695 ntBASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Gm28662-201ENSMUST00000188446 695 ntBASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Gm28251-201ENSMUST00000188835 695 ntBASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Gm37318-201ENSMUST00000194325 695 ntBASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Gm38117-201ENSMUST00000194653 939 ntBASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Gm38017-201ENSMUST00000194768 695 ntBASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Gm37287-201ENSMUST00000195449 695 ntBASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Gm37793-201ENSMUST00000195548 695 ntBASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Smarcc2Q6PDG5 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Gm14058-201ENSMUST00000116082 735 ntBASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Gm12857-201ENSMUST00000117678 592 ntBASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Mir8093-201ENSMUST00000185043 137 ntBASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Gm5982-201ENSMUST00000196234 512 ntBASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Gm2553-201ENSMUST00000215986 605 ntBASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Smarcc2Q6PDG5 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Smarcc2Q6PDG5 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms