Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Slx4Q6P1D7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Gm23595-201ENSMUST00000104306 130 ntBASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Gm6518-201ENSMUST00000208450 342 ntBASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Gm9915-201ENSMUST00000066196 1383 ntBASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC17.68■□□□□ 0.42
Slx4Q6P1D7 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Slx4Q6P1D7 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slx4Q6P1D7 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slx4Q6P1D7 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slx4Q6P1D7 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slx4Q6P1D7 Gm42499-201ENSMUST00000196193 1412 ntBASIC17.67■□□□□ 0.42
Slx4Q6P1D7 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slx4Q6P1D7 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slx4Q6P1D7 Gm14398-201ENSMUST00000117287 1073 ntBASIC17.67■□□□□ 0.42
Slx4Q6P1D7 Gm12986-201ENSMUST00000119037 967 ntBASIC17.67■□□□□ 0.42
Slx4Q6P1D7 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC17.67■□□□□ 0.42
Slx4Q6P1D7 Olfml3-204ENSMUST00000169286 874 ntBASIC17.67■□□□□ 0.42
Slx4Q6P1D7 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC17.67■□□□□ 0.42
Slx4Q6P1D7 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC17.67■□□□□ 0.42
Slx4Q6P1D7 CT025689.1-201ENSMUST00000225214 283 ntBASIC17.67■□□□□ 0.42
Slx4Q6P1D7 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slx4Q6P1D7 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slx4Q6P1D7 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slx4Q6P1D7 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slx4Q6P1D7 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slx4Q6P1D7 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slx4Q6P1D7 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Slx4Q6P1D7 Gm28424-201ENSMUST00000187393 1319 ntBASIC17.67■□□□□ 0.42
Slx4Q6P1D7 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slx4Q6P1D7 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slx4Q6P1D7 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Gm26313-201ENSMUST00000157770 308 ntBASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Gm24294-201ENSMUST00000158295 277 ntBASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Gm20493-201ENSMUST00000173706 213 ntBASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Gm19927-201ENSMUST00000185792 781 ntBASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Gm29304-201ENSMUST00000186555 695 ntBASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Gm29223-201ENSMUST00000188867 695 ntBASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Gm36982-201ENSMUST00000193796 1128 ntBASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Gm37921-201ENSMUST00000194333 695 ntBASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Gm43966-201ENSMUST00000203301 612 ntBASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 AC122024.3-201ENSMUST00000217719 294 ntBASIC17.66■□□□□ 0.42
Slx4Q6P1D7 AC129975.1-201ENSMUST00000224816 592 ntBASIC17.66■□□□□ 0.42
Slx4Q6P1D7 AC159002.1-201ENSMUST00000226714 924 ntBASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Prss23os-202ENSMUST00000179361 1362 ntBASIC17.66■□□□□ 0.42
Slx4Q6P1D7 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 AC159810.1-201ENSMUST00000214838 1480 ntBASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slx4Q6P1D7 Gm4462-201ENSMUST00000166453 492 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms