Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Krt39Q6IFX4 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Gm11930-201ENSMUST00000117788 190 ntBASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Gm8885-201ENSMUST00000189382 598 ntBASIC12.86□□□□□ -0.35
Krt39Q6IFX4 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Gm45598-202ENSMUST00000210719 986 ntBASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Krt39Q6IFX4 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Krt39Q6IFX4 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms