Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Gm15207-201ENSMUST00000119259 442 ntBASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.12□□□□□ -0.47
Trim38Q5SZ99 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Mir8093-201ENSMUST00000185043 137 ntBASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Gm37666-201ENSMUST00000194110 866 ntBASIC12.12□□□□□ -0.47
Trim38Q5SZ99 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim38Q5SZ99 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Gm24749-201ENSMUST00000157838 343 ntBASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Gm7940-201ENSMUST00000218195 769 ntBASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Gm807-202ENSMUST00000224929 408 ntBASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim38Q5SZ99 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
Trim38Q5SZ99 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim38Q5SZ99 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim38Q5SZ99 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trim38Q5SZ99 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim38Q5SZ99 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim38Q5SZ99 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim38Q5SZ99 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim38Q5SZ99 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.1□□□□□ -0.47
Trim38Q5SZ99 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.1□□□□□ -0.47
Trim38Q5SZ99 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim38Q5SZ99 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim38Q5SZ99 Gm23949-201ENSMUST00000104027 127 ntBASIC12.1□□□□□ -0.47
Trim38Q5SZ99 Gm11500-201ENSMUST00000118237 601 ntBASIC12.1□□□□□ -0.47
Trim38Q5SZ99 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim38Q5SZ99 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms