Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Gm18514-201ENSMUST00000218980 436 ntBASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Gm16380-201ENSMUST00000077997 478 ntBASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Gm23105-201ENSMUST00000083719 134 ntBASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx49Q4FZF3 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Gm26989-201ENSMUST00000182608 749 ntBASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Gm6450-201ENSMUST00000200896 574 ntBASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Gm45500-201ENSMUST00000211676 803 ntBASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Gm7940-201ENSMUST00000218195 769 ntBASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Gm43447-201ENSMUST00000198471 1535 ntBASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx49Q4FZF3 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
Ddx49Q4FZF3 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ddx49Q4FZF3 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx49Q4FZF3 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx49Q4FZF3 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ddx49Q4FZF3 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx49Q4FZF3 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx49Q4FZF3 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx49Q4FZF3 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx49Q4FZF3 Gm14892-201ENSMUST00000117636 267 ntBASIC13.62□□□□□ -0.23
Ddx49Q4FZF3 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx49Q4FZF3 Gm15615-201ENSMUST00000118876 198 ntBASIC13.62□□□□□ -0.23
Ddx49Q4FZF3 Gm42779-201ENSMUST00000198807 406 ntBASIC13.62□□□□□ -0.23
Ddx49Q4FZF3 Gm18561-201ENSMUST00000206027 804 ntBASIC13.62□□□□□ -0.23
Ddx49Q4FZF3 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx49Q4FZF3 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC13.62□□□□□ -0.23
Ddx49Q4FZF3 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.62□□□□□ -0.23
Ddx49Q4FZF3 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx49Q4FZF3 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx49Q4FZF3 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx49Q4FZF3 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx49Q4FZF3 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx49Q4FZF3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx49Q4FZF3 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ddx49Q4FZF3 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ddx49Q4FZF3 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Ddx49Q4FZF3 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms