Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cux2P70298 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cux2P70298 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Cux2P70298 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cux2P70298 Gm5944-201ENSMUST00000118182 1001 ntBASIC18.77■□□□□ 0.6
Cux2P70298 Gm11700-201ENSMUST00000119409 403 ntBASIC18.77■□□□□ 0.6
Cux2P70298 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC18.77■□□□□ 0.6
Cux2P70298 Kif4-ps-202ENSMUST00000185083 652 ntBASIC18.77■□□□□ 0.6
Cux2P70298 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cux2P70298 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cux2P70298 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cux2P70298 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC18.77■□□□□ 0.6
Cux2P70298 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cux2P70298 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cux2P70298 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC18.77■□□□□ 0.6
Cux2P70298 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cux2P70298 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cux2P70298 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cux2P70298 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cux2P70298 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cux2P70298 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cux2P70298 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cux2P70298 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cux2P70298 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Cux2P70298 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cux2P70298 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cux2P70298 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cux2P70298 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cux2P70298 Gm8873-201ENSMUST00000217847 1439 ntBASIC18.77■□□□□ 0.59
Cux2P70298 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cux2P70298 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cux2P70298 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC18.76■□□□□ 0.59
Cux2P70298 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC18.76■□□□□ 0.59
Cux2P70298 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cux2P70298 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC18.76■□□□□ 0.59
Cux2P70298 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cux2P70298 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cux2P70298 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cux2P70298 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cux2P70298 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cux2P70298 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cux2P70298 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cux2P70298 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cux2P70298 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC18.75■□□□□ 0.59
Cux2P70298 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cux2P70298 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cux2P70298 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC18.75■□□□□ 0.59
Cux2P70298 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC18.75■□□□□ 0.59
Cux2P70298 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
Cux2P70298 Gm5738-201ENSMUST00000206016 779 ntBASIC18.75■□□□□ 0.59
Cux2P70298 Gm5650-201ENSMUST00000209641 598 ntBASIC18.75■□□□□ 0.59
Cux2P70298 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cux2P70298 AC159196.1-201ENSMUST00000225524 377 ntBASIC18.75■□□□□ 0.59
Cux2P70298 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cux2P70298 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cux2P70298 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cux2P70298 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cux2P70298 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cux2P70298 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cux2P70298 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cux2P70298 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cux2P70298 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cux2P70298 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cux2P70298 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cux2P70298 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cux2P70298 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cux2P70298 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cux2P70298 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cux2P70298 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cux2P70298 Gm43152-201ENSMUST00000202495 1638 ntBASIC18.75■□□□□ 0.59
Cux2P70298 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cux2P70298 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cux2P70298 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cux2P70298 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Cux2P70298 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cux2P70298 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cux2P70298 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cux2P70298 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cux2P70298 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cux2P70298 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cux2P70298 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC18.75■□□□□ 0.59
Cux2P70298 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cux2P70298 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cux2P70298 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cux2P70298 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cux2P70298 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cux2P70298 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Cux2P70298 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cux2P70298 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cux2P70298 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cux2P70298 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC18.74■□□□□ 0.59
Cux2P70298 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC18.74■□□□□ 0.59
Cux2P70298 CT010505.2-201ENSMUST00000227918 998 ntBASIC18.74■□□□□ 0.59
Cux2P70298 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC18.74■□□□□ 0.59
Cux2P70298 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cux2P70298 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cux2P70298 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cux2P70298 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cux2P70298 Gm5053-201ENSMUST00000208361 1678 ntBASIC18.74■□□□□ 0.59
Cux2P70298 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms