Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Fdft1P53798 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fdft1P53798 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fdft1P53798 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.68□□□□□ -0.54
Fdft1P53798 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fdft1P53798 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.67□□□□□ -0.54
Fdft1P53798 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.67□□□□□ -0.54
Fdft1P53798 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.67□□□□□ -0.54
Fdft1P53798 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Fdft1P53798 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Fdft1P53798 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.67□□□□□ -0.54
Fdft1P53798 Gm13665-201ENSMUST00000120830 528 ntBASIC11.67□□□□□ -0.54
Fdft1P53798 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.67□□□□□ -0.54
Fdft1P53798 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Fdft1P53798 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.67□□□□□ -0.54
Fdft1P53798 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.67□□□□□ -0.54
Fdft1P53798 Gm6082-201ENSMUST00000215204 454 ntBASIC11.67□□□□□ -0.54
Fdft1P53798 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.67□□□□□ -0.54
Fdft1P53798 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Fdft1P53798 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.67□□□□□ -0.54
Fdft1P53798 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.67□□□□□ -0.54
Fdft1P53798 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.67□□□□□ -0.54
Fdft1P53798 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fdft1P53798 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Fdft1P53798 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fdft1P53798 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fdft1P53798 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fdft1P53798 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fdft1P53798 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Fdft1P53798 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Fdft1P53798 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fdft1P53798 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fdft1P53798 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.66□□□□□ -0.54
Fdft1P53798 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.66□□□□□ -0.54
Fdft1P53798 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.66□□□□□ -0.54
Fdft1P53798 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fdft1P53798 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fdft1P53798 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fdft1P53798 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Fdft1P53798 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fdft1P53798 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.66□□□□□ -0.54
Fdft1P53798 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Fdft1P53798 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Fdft1P53798 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fdft1P53798 Gm25668-201ENSMUST00000157700 129 ntBASIC11.66□□□□□ -0.54
Fdft1P53798 Gm26361-201ENSMUST00000158868 186 ntBASIC11.66□□□□□ -0.54
Fdft1P53798 Gm25890-201ENSMUST00000177643 165 ntBASIC11.66□□□□□ -0.54
Fdft1P53798 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.66□□□□□ -0.54
Fdft1P53798 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.66□□□□□ -0.54
Fdft1P53798 Gm22614-201ENSMUST00000178300 165 ntBASIC11.66□□□□□ -0.54
Fdft1P53798 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.66□□□□□ -0.54
Fdft1P53798 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Fdft1P53798 Gm19287-201ENSMUST00000203190 358 ntBASIC11.66□□□□□ -0.54
Fdft1P53798 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Fdft1P53798 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.66□□□□□ -0.54
Fdft1P53798 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fdft1P53798 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fdft1P53798 Gm22042-201ENSMUST00000082989 165 ntBASIC11.66□□□□□ -0.54
Fdft1P53798 Gm26110-201ENSMUST00000083971 165 ntBASIC11.66□□□□□ -0.54
Fdft1P53798 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fdft1P53798 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fdft1P53798 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fdft1P53798 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fdft1P53798 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fdft1P53798 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fdft1P53798 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Fdft1P53798 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Fdft1P53798 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Fdft1P53798 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms