Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Rubie-203ENSMUST00000227803 2430 ntBASIC11.54□□□□□ -0.56
Pdx1P52946 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Pdx1P52946 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdx1P52946 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pdx1P52946 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pdx1P52946 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pdx1P52946 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.53□□□□□ -0.56
Pdx1P52946 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.53□□□□□ -0.56
Pdx1P52946 Gm24891-201ENSMUST00000104391 136 ntBASIC11.53□□□□□ -0.56
Pdx1P52946 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.53□□□□□ -0.56
Pdx1P52946 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.53□□□□□ -0.56
Pdx1P52946 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.53□□□□□ -0.56
Pdx1P52946 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Pdx1P52946 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.53□□□□□ -0.56
Pdx1P52946 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.53□□□□□ -0.56
Pdx1P52946 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.53□□□□□ -0.56
Pdx1P52946 Gm38151-201ENSMUST00000195085 289 ntBASIC11.53□□□□□ -0.56
Pdx1P52946 Lect2-202ENSMUST00000225183 823 ntBASIC11.53□□□□□ -0.56
Pdx1P52946 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.53□□□□□ -0.56
Pdx1P52946 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.53□□□□□ -0.56
Pdx1P52946 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pdx1P52946 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.53□□□□□ -0.56
Pdx1P52946 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Pdx1P52946 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.53□□□□□ -0.56
Pdx1P52946 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.53□□□□□ -0.56
Pdx1P52946 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.53□□□□□ -0.56
Pdx1P52946 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pdx1P52946 Erich3-203ENSMUST00000189969 3460 ntBASIC11.52□□□□□ -0.56
Pdx1P52946 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pdx1P52946 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pdx1P52946 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pdx1P52946 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Pdx1P52946 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdx1P52946 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.52□□□□□ -0.57
Pdx1P52946 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Pdx1P52946 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pdx1P52946 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.52□□□□□ -0.57
Pdx1P52946 Gm23251-201ENSMUST00000103773 110 ntBASIC11.52□□□□□ -0.57
Pdx1P52946 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdx1P52946 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Pdx1P52946 Gm13916-201ENSMUST00000117368 628 ntBASIC11.52□□□□□ -0.57
Pdx1P52946 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.52□□□□□ -0.57
Pdx1P52946 Gm15595-201ENSMUST00000120840 961 ntBASIC11.52□□□□□ -0.57
Pdx1P52946 Gm13263-201ENSMUST00000121271 838 ntBASIC11.52□□□□□ -0.57
Pdx1P52946 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdx1P52946 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.52□□□□□ -0.57
Pdx1P52946 Mir7070-201ENSMUST00000183657 86 ntBASIC11.52□□□□□ -0.57
Pdx1P52946 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.52□□□□□ -0.57
Pdx1P52946 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdx1P52946 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.52□□□□□ -0.57
Pdx1P52946 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.52□□□□□ -0.57
Pdx1P52946 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdx1P52946 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.52□□□□□ -0.57
Pdx1P52946 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdx1P52946 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pdx1P52946 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.51□□□□□ -0.57
Pdx1P52946 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pdx1P52946 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdx1P52946 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pdx1P52946 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pdx1P52946 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.51□□□□□ -0.57
Pdx1P52946 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdx1P52946 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Pdx1P52946 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.51□□□□□ -0.57
Pdx1P52946 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdx1P52946 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.51□□□□□ -0.57
Pdx1P52946 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.51□□□□□ -0.57
Pdx1P52946 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdx1P52946 Mir5120-201ENSMUST00000175020 78 ntBASIC11.51□□□□□ -0.57
Pdx1P52946 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.51□□□□□ -0.57
Pdx1P52946 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.51□□□□□ -0.57
Pdx1P52946 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.51□□□□□ -0.57
Pdx1P52946 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pdx1P52946 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pdx1P52946 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms