Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Gm7851-201ENSMUST00000117574 323 ntBASIC9.62□□□□□ -0.87
Timp3P39876 Gm13045-201ENSMUST00000119019 712 ntBASIC9.62□□□□□ -0.87
Timp3P39876 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC9.62□□□□□ -0.87
Timp3P39876 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
Timp3P39876 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Gm3508-201ENSMUST00000186012 792 ntBASIC9.62□□□□□ -0.87
Timp3P39876 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC9.62□□□□□ -0.87
Timp3P39876 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
Timp3P39876 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 AC159819.2-201ENSMUST00000216151 342 ntBASIC9.62□□□□□ -0.87
Timp3P39876 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Timp3P39876 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC9.62□□□□□ -0.87
Timp3P39876 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Timp3P39876 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC9.62□□□□□ -0.87
Timp3P39876 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC9.62□□□□□ -0.87
Timp3P39876 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Gm18262-201ENSMUST00000222560 1946 ntBASIC9.62□□□□□ -0.87
Timp3P39876 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Timp3P39876 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Timp3P39876 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.62□□□□□ -0.87
Timp3P39876 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Timp3P39876 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Timp3P39876 Gm37368-201ENSMUST00000193173 3212 ntBASIC9.61□□□□□ -0.87
Timp3P39876 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Gm45776-201ENSMUST00000212366 1522 ntBASIC9.61□□□□□ -0.87
Timp3P39876 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC9.61□□□□□ -0.87
Timp3P39876 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC9.61□□□□□ -0.87
Timp3P39876 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Timp3P39876 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC9.61□□□□□ -0.87
Timp3P39876 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC9.61□□□□□ -0.87
Timp3P39876 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC9.61□□□□□ -0.87
Timp3P39876 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 AC122291.1-201ENSMUST00000228937 5748 ntBASIC9.61□□□□□ -0.87
Timp3P39876 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Timp3P39876 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
Timp3P39876 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC9.61□□□□□ -0.87
Timp3P39876 Gm7722-201ENSMUST00000120646 741 ntBASIC9.61□□□□□ -0.87
Timp3P39876 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC9.61□□□□□ -0.87
Timp3P39876 Gm11660-201ENSMUST00000120955 412 ntBASIC9.61□□□□□ -0.87
Timp3P39876 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Mir1943-201ENSMUST00000158276 73 ntBASIC9.61□□□□□ -0.87
Timp3P39876 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC9.61□□□□□ -0.87
Timp3P39876 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Gm24514-201ENSMUST00000174961 285 ntBASIC9.61□□□□□ -0.87
Timp3P39876 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC9.61□□□□□ -0.87
Timp3P39876 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC9.61□□□□□ -0.87
Timp3P39876 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Ntng1-201ENSMUST00000051253 327 ntBASIC9.61□□□□□ -0.87
Timp3P39876 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC9.61□□□□□ -0.87
Timp3P39876 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Timp3P39876 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Timp3P39876 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC9.61□□□□□ -0.87
Timp3P39876 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Timp3P39876 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Timp3P39876 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.61□□□□□ -0.87
Timp3P39876 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Timp3P39876 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Timp3P39876 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms