Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.95□□□□□ -0.5
Mmp13P33435 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.95□□□□□ -0.5
Mmp13P33435 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Mmp13P33435 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Mmp13P33435 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.94□□□□□ -0.5
Mmp13P33435 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Mmp13P33435 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Mmp13P33435 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.94□□□□□ -0.5
Mmp13P33435 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Mmp13P33435 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Mmp13P33435 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Mmp13P33435 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Mmp13P33435 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Mmp13P33435 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Mmp13P33435 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Mmp13P33435 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Mmp13P33435 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.94□□□□□ -0.5
Mmp13P33435 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Mmp13P33435 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Mmp13P33435 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Mmp13P33435 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Mmp13P33435 Gm14644-201ENSMUST00000116671 647 ntBASIC11.94□□□□□ -0.5
Mmp13P33435 Gm11989-201ENSMUST00000117240 672 ntBASIC11.94□□□□□ -0.5
Mmp13P33435 Gm11362-201ENSMUST00000118838 850 ntBASIC11.94□□□□□ -0.5
Mmp13P33435 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.94□□□□□ -0.5
Mmp13P33435 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Mmp13P33435 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.94□□□□□ -0.5
Mmp13P33435 Gm6114-201ENSMUST00000182472 968 ntBASIC11.94□□□□□ -0.5
Mmp13P33435 Gm2260-201ENSMUST00000184965 657 ntBASIC11.94□□□□□ -0.5
Mmp13P33435 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.94□□□□□ -0.5
Mmp13P33435 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.94□□□□□ -0.5
Mmp13P33435 Gm38314-201ENSMUST00000195709 625 ntBASIC11.94□□□□□ -0.5
Mmp13P33435 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.94□□□□□ -0.5
Mmp13P33435 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Mmp13P33435 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Mmp13P33435 Gm8385-201ENSMUST00000058999 643 ntBASIC11.94□□□□□ -0.5
Mmp13P33435 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Mmp13P33435 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Mmp13P33435 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Mmp13P33435 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Mmp13P33435 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Mmp13P33435 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Mmp13P33435 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Mmp13P33435 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.94□□□□□ -0.5
Mmp13P33435 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.94□□□□□ -0.5
Mmp13P33435 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Mmp13P33435 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.93□□□□□ -0.5
Mmp13P33435 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Gm11439-201ENSMUST00000118598 409 ntBASIC11.93□□□□□ -0.5
Mmp13P33435 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Mmp13P33435 Gm17812-201ENSMUST00000204935 318 ntBASIC11.93□□□□□ -0.5
Mmp13P33435 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Mmp13P33435 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.93□□□□□ -0.5
Mmp13P33435 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.93□□□□□ -0.5
Mmp13P33435 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.93□□□□□ -0.5
Mmp13P33435 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.93□□□□□ -0.5
Mmp13P33435 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Mmp13P33435 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms