Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.05□□□□□ -0.8
Slc6a1P31648 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Gm18054-201ENSMUST00000207539 555 ntBASIC10.05□□□□□ -0.8
Slc6a1P31648 Gm45880-201ENSMUST00000213041 853 ntBASIC10.05□□□□□ -0.8
Slc6a1P31648 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.05□□□□□ -0.8
Slc6a1P31648 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.05□□□□□ -0.8
Slc6a1P31648 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.05□□□□□ -0.8
Slc6a1P31648 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.05□□□□□ -0.8
Slc6a1P31648 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.05□□□□□ -0.8
Slc6a1P31648 Gm26232-201ENSMUST00000083360 166 ntBASIC10.05□□□□□ -0.8
Slc6a1P31648 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.05□□□□□ -0.8
Slc6a1P31648 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Slc6a1P31648 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.05□□□□□ -0.8
Slc6a1P31648 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.05□□□□□ -0.8
Slc6a1P31648 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.05□□□□□ -0.8
Slc6a1P31648 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Slc6a1P31648 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Slc6a1P31648 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.04□□□□□ -0.8
Slc6a1P31648 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Slc6a1P31648 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.04□□□□□ -0.8
Slc6a1P31648 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Slc6a1P31648 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.04□□□□□ -0.8
Slc6a1P31648 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Slc6a1P31648 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.04□□□□□ -0.8
Slc6a1P31648 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.04□□□□□ -0.8
Slc6a1P31648 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.04□□□□□ -0.8
Slc6a1P31648 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Slc6a1P31648 Gm6439-201ENSMUST00000199849 862 ntBASIC10.04□□□□□ -0.8
Slc6a1P31648 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.04□□□□□ -0.8
Slc6a1P31648 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Gm19163-201ENSMUST00000223313 780 ntBASIC10.04□□□□□ -0.8
Slc6a1P31648 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.04□□□□□ -0.8
Slc6a1P31648 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Slc6a1P31648 Gm28693-201ENSMUST00000189622 2638 ntBASIC10.04□□□□□ -0.8
Slc6a1P31648 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Slc6a1P31648 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Slc6a1P31648 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.04□□□□□ -0.8
Slc6a1P31648 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Slc6a1P31648 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Slc6a1P31648 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Slc6a1P31648 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Slc6a1P31648 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Slc6a1P31648 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Slc6a1P31648 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms