Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm44008-201ENSMUST00000204345 412 ntBASIC13.37□□□□□ -0.27
Vcam1P29533 Gm18059-201ENSMUST00000208073 580 ntBASIC13.37□□□□□ -0.27
Vcam1P29533 AC122891.1-201ENSMUST00000218671 268 ntBASIC13.37□□□□□ -0.27
Vcam1P29533 Gm18968-201ENSMUST00000221319 862 ntBASIC13.37□□□□□ -0.27
Vcam1P29533 Gm5805-201ENSMUST00000072779 456 ntBASIC13.37□□□□□ -0.27
Vcam1P29533 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcam1P29533 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcam1P29533 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcam1P29533 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcam1P29533 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcam1P29533 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcam1P29533 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vcam1P29533 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcam1P29533 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vcam1P29533 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcam1P29533 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcam1P29533 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcam1P29533 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Vcam1P29533 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcam1P29533 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcam1P29533 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vcam1P29533 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vcam1P29533 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.36□□□□□ -0.27
Vcam1P29533 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Vcam1P29533 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcam1P29533 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcam1P29533 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcam1P29533 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Vcam1P29533 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vcam1P29533 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC13.36□□□□□ -0.27
Vcam1P29533 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.36□□□□□ -0.27
Vcam1P29533 Gm25880-201ENSMUST00000104331 132 ntBASIC13.36□□□□□ -0.27
Vcam1P29533 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vcam1P29533 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vcam1P29533 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vcam1P29533 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC13.36□□□□□ -0.27
Vcam1P29533 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC13.36□□□□□ -0.27
Vcam1P29533 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Vcam1P29533 Gm37638-201ENSMUST00000194337 1123 ntBASIC13.36□□□□□ -0.27
Vcam1P29533 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC13.36□□□□□ -0.27
Vcam1P29533 Gm18514-201ENSMUST00000218980 436 ntBASIC13.36□□□□□ -0.27
Vcam1P29533 AC153152.3-201ENSMUST00000222188 1135 ntBASIC13.36□□□□□ -0.27
Vcam1P29533 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcam1P29533 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Vcam1P29533 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Vcam1P29533 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.36□□□□□ -0.27
Vcam1P29533 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Vcam1P29533 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcam1P29533 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcam1P29533 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcam1P29533 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.36□□□□□ -0.27
Vcam1P29533 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcam1P29533 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcam1P29533 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vcam1P29533 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vcam1P29533 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Vcam1P29533 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vcam1P29533 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vcam1P29533 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vcam1P29533 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vcam1P29533 Gm14807-201ENSMUST00000116640 983 ntBASIC13.35□□□□□ -0.27
Vcam1P29533 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC13.35□□□□□ -0.27
Vcam1P29533 Gm14270-201ENSMUST00000118388 846 ntBASIC13.35□□□□□ -0.27
Vcam1P29533 Gm12274-201ENSMUST00000120062 385 ntBASIC13.35□□□□□ -0.27
Vcam1P29533 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC13.35□□□□□ -0.27
Vcam1P29533 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.35□□□□□ -0.27
Vcam1P29533 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vcam1P29533 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Vcam1P29533 Gm5342-201ENSMUST00000181982 1003 ntBASIC13.35□□□□□ -0.27
Vcam1P29533 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vcam1P29533 Gm5599-201ENSMUST00000209602 788 ntBASIC13.35□□□□□ -0.27
Vcam1P29533 Gm45856-201ENSMUST00000212752 416 ntBASIC13.35□□□□□ -0.27
Vcam1P29533 AC134248.1-201ENSMUST00000216113 1176 ntBASIC13.35□□□□□ -0.27
Vcam1P29533 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.35□□□□□ -0.27
Vcam1P29533 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Vcam1P29533 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vcam1P29533 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.35□□□□□ -0.27
Vcam1P29533 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.35□□□□□ -0.27
Vcam1P29533 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vcam1P29533 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.35□□□□□ -0.27
Vcam1P29533 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
Vcam1P29533 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vcam1P29533 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vcam1P29533 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vcam1P29533 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vcam1P29533 Gm28424-201ENSMUST00000187393 1319 ntBASIC13.35□□□□□ -0.27
Vcam1P29533 CT010447.1-201ENSMUST00000225657 1608 ntBASIC13.35□□□□□ -0.27
Vcam1P29533 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Vcam1P29533 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vcam1P29533 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcam1P29533 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Vcam1P29533 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcam1P29533 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcam1P29533 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcam1P29533 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Vcam1P29533 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcam1P29533 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcam1P29533 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Vcam1P29533 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Vcam1P29533 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms