Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.38□□□□□ -0.43
TnfP06804 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TnfP06804 Matn2-203ENSMUST00000226766 3252 ntBASIC12.38□□□□□ -0.43
TnfP06804 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TnfP06804 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.38□□□□□ -0.43
TnfP06804 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TnfP06804 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TnfP06804 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
TnfP06804 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
TnfP06804 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TnfP06804 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.37□□□□□ -0.43
TnfP06804 Gm7841-201ENSMUST00000122108 1629 ntBASIC12.37□□□□□ -0.43
TnfP06804 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TnfP06804 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
TnfP06804 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
TnfP06804 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TnfP06804 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TnfP06804 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
TnfP06804 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TnfP06804 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TnfP06804 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
TnfP06804 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.37□□□□□ -0.43
TnfP06804 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TnfP06804 Gm11451-201ENSMUST00000118946 630 ntBASIC12.37□□□□□ -0.43
TnfP06804 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TnfP06804 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.37□□□□□ -0.43
TnfP06804 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TnfP06804 Gm22138-201ENSMUST00000158748 128 ntBASIC12.37□□□□□ -0.43
TnfP06804 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TnfP06804 Gm20495-201ENSMUST00000173902 235 ntBASIC12.37□□□□□ -0.43
TnfP06804 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
TnfP06804 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.37□□□□□ -0.43
TnfP06804 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.37□□□□□ -0.43
TnfP06804 Gm35960-201ENSMUST00000202712 767 ntBASIC12.37□□□□□ -0.43
TnfP06804 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.37□□□□□ -0.43
TnfP06804 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TnfP06804 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.37□□□□□ -0.43
TnfP06804 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TnfP06804 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TnfP06804 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
TnfP06804 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TnfP06804 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TnfP06804 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TnfP06804 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TnfP06804 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
TnfP06804 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TnfP06804 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TnfP06804 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
TnfP06804 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.36□□□□□ -0.43
TnfP06804 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.36□□□□□ -0.43
TnfP06804 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.36□□□□□ -0.43
TnfP06804 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.36□□□□□ -0.43
TnfP06804 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TnfP06804 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
TnfP06804 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
TnfP06804 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TnfP06804 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TnfP06804 Gm14071-201ENSMUST00000117817 509 ntBASIC12.36□□□□□ -0.43
TnfP06804 Gm11500-201ENSMUST00000118237 601 ntBASIC12.36□□□□□ -0.43
TnfP06804 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.36□□□□□ -0.43
TnfP06804 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TnfP06804 Gm44329-201ENSMUST00000197469 112 ntBASIC12.36□□□□□ -0.43
TnfP06804 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TnfP06804 Gm5996-201ENSMUST00000211110 718 ntBASIC12.36□□□□□ -0.43
TnfP06804 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TnfP06804 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TnfP06804 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
TnfP06804 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
TnfP06804 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.36□□□□□ -0.43
TnfP06804 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
TnfP06804 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TnfP06804 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TnfP06804 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TnfP06804 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TnfP06804 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
TnfP06804 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TnfP06804 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TnfP06804 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TnfP06804 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TnfP06804 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.36□□□□□ -0.43
TnfP06804 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TnfP06804 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TnfP06804 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
TnfP06804 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
TnfP06804 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
TnfP06804 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TnfP06804 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TnfP06804 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TnfP06804 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TnfP06804 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TnfP06804 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TnfP06804 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TnfP06804 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TnfP06804 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.35□□□□□ -0.43
TnfP06804 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TnfP06804 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TnfP06804 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.35□□□□□ -0.43
TnfP06804 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.35□□□□□ -0.43
TnfP06804 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
TnfP06804 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms