Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.16□□□□□ -0.62
P04213 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
P04213 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
P04213 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
P04213 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
P04213 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
P04213 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P04213 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P04213 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P04213 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P04213 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.16□□□□□ -0.62
P04213 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P04213 Gm14071-201ENSMUST00000117817 509 ntBASIC11.16□□□□□ -0.62
P04213 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.16□□□□□ -0.62
P04213 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.16□□□□□ -0.62
P04213 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
P04213 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.16□□□□□ -0.62
P04213 Gm3332-201ENSMUST00000189337 928 ntBASIC11.16□□□□□ -0.62
P04213 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.16□□□□□ -0.62
P04213 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.16□□□□□ -0.62
P04213 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
P04213 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
P04213 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P04213 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P04213 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
P04213 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P04213 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
P04213 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
P04213 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
P04213 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P04213 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.16□□□□□ -0.62
P04213 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P04213 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
P04213 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.16□□□□□ -0.62
P04213 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
P04213 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
P04213 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P04213 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
P04213 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
P04213 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
P04213 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
P04213 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P04213 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.15□□□□□ -0.62
P04213 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
P04213 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P04213 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
P04213 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P04213 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P04213 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P04213 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P04213 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
P04213 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.15□□□□□ -0.62
P04213 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.15□□□□□ -0.62
P04213 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
P04213 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
P04213 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
P04213 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P04213 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.15□□□□□ -0.62
P04213 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P04213 Gm14130-201ENSMUST00000118417 987 ntBASIC11.15□□□□□ -0.62
P04213 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
P04213 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.15□□□□□ -0.62
P04213 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.15□□□□□ -0.62
P04213 Rps4l-202ENSMUST00000204242 789 ntBASIC11.15□□□□□ -0.62
P04213 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.15□□□□□ -0.62
P04213 Gm807-202ENSMUST00000224929 408 ntBASIC11.15□□□□□ -0.62
P04213 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.15□□□□□ -0.62
P04213 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
P04213 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P04213 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
P04213 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
P04213 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P04213 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
P04213 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
P04213 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P04213 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.15□□□□□ -0.62
P04213 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
P04213 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
P04213 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
P04213 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
P04213 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.15□□□□□ -0.62
P04213 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
P04213 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
P04213 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
P04213 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04213 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
P04213 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04213 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P04213 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P04213 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04213 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.14□□□□□ -0.63
P04213 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04213 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04213 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P04213 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P04213 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
P04213 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
P04213 Gm23596-201ENSMUST00000104304 132 ntBASIC11.14□□□□□ -0.63
P04213 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
P04213 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms