Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Ptch2O35595 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ptch2O35595 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ptch2O35595 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ptch2O35595 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ptch2O35595 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ptch2O35595 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12□□□□□ -0.49
Ptch2O35595 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12□□□□□ -0.49
Ptch2O35595 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12□□□□□ -0.49
Ptch2O35595 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ptch2O35595 Gm7150-201ENSMUST00000122032 981 ntBASIC12□□□□□ -0.49
Ptch2O35595 Gm13182-201ENSMUST00000122241 312 ntBASIC12□□□□□ -0.49
Ptch2O35595 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ptch2O35595 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12□□□□□ -0.49
Ptch2O35595 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ptch2O35595 Gm28937-201ENSMUST00000185413 695 ntBASIC12□□□□□ -0.49
Ptch2O35595 Gm29400-201ENSMUST00000187208 695 ntBASIC12□□□□□ -0.49
Ptch2O35595 Gm28324-201ENSMUST00000187913 264 ntBASIC12□□□□□ -0.49
Ptch2O35595 Gm28662-201ENSMUST00000188446 695 ntBASIC12□□□□□ -0.49
Ptch2O35595 Gm28251-201ENSMUST00000188835 695 ntBASIC12□□□□□ -0.49
Ptch2O35595 Gm37318-201ENSMUST00000194325 695 ntBASIC12□□□□□ -0.49
Ptch2O35595 Gm38017-201ENSMUST00000194768 695 ntBASIC12□□□□□ -0.49
Ptch2O35595 Gm37287-201ENSMUST00000195449 695 ntBASIC12□□□□□ -0.49
Ptch2O35595 Gm37793-201ENSMUST00000195548 695 ntBASIC12□□□□□ -0.49
Ptch2O35595 Gm2875-201ENSMUST00000211333 360 ntBASIC12□□□□□ -0.49
Ptch2O35595 Gm7940-201ENSMUST00000218195 769 ntBASIC12□□□□□ -0.49
Ptch2O35595 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ptch2O35595 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12□□□□□ -0.49
Ptch2O35595 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12□□□□□ -0.49
Ptch2O35595 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ptch2O35595 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12□□□□□ -0.49
Ptch2O35595 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ptch2O35595 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ptch2O35595 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ptch2O35595 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ptch2O35595 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ptch2O35595 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ptch2O35595 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ptch2O35595 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12□□□□□ -0.49
Ptch2O35595 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12□□□□□ -0.49
Ptch2O35595 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ptch2O35595 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ptch2O35595 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ptch2O35595 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ptch2O35595 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ptch2O35595 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ptch2O35595 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Ptch2O35595 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Ptch2O35595 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.99□□□□□ -0.49
Ptch2O35595 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Ptch2O35595 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Ptch2O35595 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.99□□□□□ -0.49
Ptch2O35595 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.99□□□□□ -0.49
Ptch2O35595 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.99□□□□□ -0.49
Ptch2O35595 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.99□□□□□ -0.49
Ptch2O35595 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 Gm8342-201ENSMUST00000209839 757 ntBASIC11.99□□□□□ -0.49
Ptch2O35595 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.99□□□□□ -0.49
Ptch2O35595 Prrxl1-205ENSMUST00000228878 723 ntBASIC11.99□□□□□ -0.49
Ptch2O35595 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Ptch2O35595 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.99□□□□□ -0.49
Ptch2O35595 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Ptch2O35595 Gm25517-201ENSMUST00000083865 134 ntBASIC11.99□□□□□ -0.49
Ptch2O35595 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.99□□□□□ -0.49
Ptch2O35595 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ptch2O35595 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ptch2O35595 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ptch2O35595 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ptch2O35595 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ptch2O35595 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ptch2O35595 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.98□□□□□ -0.49
Ptch2O35595 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ptch2O35595 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ptch2O35595 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ptch2O35595 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ptch2O35595 Gm12516-201ENSMUST00000120819 385 ntBASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms