Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.76□□□□□ -0.53
Ccdc188F6WEU2 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc188F6WEU2 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc188F6WEU2 Ap5s1-203ENSMUST00000110208 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ccdc188F6WEU2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Gm14176-201ENSMUST00000121302 477 ntBASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Gm5529-201ENSMUST00000165691 891 ntBASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Mir3091-201ENSMUST00000175086 76 ntBASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Gm38145-201ENSMUST00000192319 693 ntBASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Gm6859-201ENSMUST00000218614 989 ntBASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 AC159006.3-201ENSMUST00000226918 664 ntBASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Ccdc188F6WEU2 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Gm24992-201ENSMUST00000157412 130 ntBASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Gm5873-201ENSMUST00000177157 1066 ntBASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Gm21778-201ENSMUST00000178779 471 ntBASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Gm9192-201ENSMUST00000183221 985 ntBASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Gm7445-201ENSMUST00000192115 340 ntBASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Gm19918-201ENSMUST00000194858 400 ntBASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ccdc188F6WEU2 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc188F6WEU2 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms