Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Gm6722-201ENSMUST00000221586 390 ntBASIC13.98□□□□□ -0.17
Ube4aE9Q735 AC153152.3-201ENSMUST00000222188 1135 ntBASIC13.98□□□□□ -0.17
Ube4aE9Q735 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Gm43760-201ENSMUST00000202120 3015 ntBASIC13.98□□□□□ -0.17
Ube4aE9Q735 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4aE9Q735 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Ube4aE9Q735 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4aE9Q735 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Gm14807-201ENSMUST00000116640 983 ntBASIC13.97□□□□□ -0.17
Ube4aE9Q735 Gm8111-201ENSMUST00000117659 987 ntBASIC13.97□□□□□ -0.17
Ube4aE9Q735 Gm8302-201ENSMUST00000119217 852 ntBASIC13.97□□□□□ -0.17
Ube4aE9Q735 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Gm29067-201ENSMUST00000190821 470 ntBASIC13.97□□□□□ -0.17
Ube4aE9Q735 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC13.97□□□□□ -0.17
Ube4aE9Q735 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.97□□□□□ -0.17
Ube4aE9Q735 Gm18294-201ENSMUST00000176980 1748 ntBASIC13.97□□□□□ -0.17
Ube4aE9Q735 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC13.97□□□□□ -0.17
Ube4aE9Q735 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4aE9Q735 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ube4aE9Q735 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.97□□□□□ -0.17
Ube4aE9Q735 AC165351.1-201ENSMUST00000219078 2020 ntBASIC13.97□□□□□ -0.17
Ube4aE9Q735 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ube4aE9Q735 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ube4aE9Q735 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube4aE9Q735 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.96□□□□□ -0.17
Ube4aE9Q735 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ube4aE9Q735 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube4aE9Q735 Gm12791-201ENSMUST00000120788 655 ntBASIC13.96□□□□□ -0.17
Ube4aE9Q735 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ube4aE9Q735 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ube4aE9Q735 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC13.96□□□□□ -0.17
Ube4aE9Q735 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ube4aE9Q735 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube4aE9Q735 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ube4aE9Q735 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.96□□□□□ -0.17
Ube4aE9Q735 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ube4aE9Q735 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.96□□□□□ -0.17
Ube4aE9Q735 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC13.96□□□□□ -0.17
Ube4aE9Q735 Gm44008-201ENSMUST00000204345 412 ntBASIC13.96□□□□□ -0.17
Ube4aE9Q735 Gm45856-201ENSMUST00000212752 416 ntBASIC13.96□□□□□ -0.17
Ube4aE9Q735 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC13.96□□□□□ -0.17
Ube4aE9Q735 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.96□□□□□ -0.17
Ube4aE9Q735 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ube4aE9Q735 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Ube4aE9Q735 Gm16380-201ENSMUST00000077997 478 ntBASIC13.96□□□□□ -0.17
Ube4aE9Q735 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.96□□□□□ -0.17
Ube4aE9Q735 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ube4aE9Q735 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ube4aE9Q735 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.96□□□□□ -0.18
Ube4aE9Q735 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC13.96□□□□□ -0.18
Ube4aE9Q735 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ube4aE9Q735 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.18
Ube4aE9Q735 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ube4aE9Q735 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
Ube4aE9Q735 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.96□□□□□ -0.18
Ube4aE9Q735 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ube4aE9Q735 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ube4aE9Q735 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube4aE9Q735 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Ube4aE9Q735 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube4aE9Q735 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ube4aE9Q735 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms