Protein–RNA interactions for Protein: B2RRD7

Brpf1, Peregrin, mousemouse

Predictions only

Length 1,212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf1B2RRD7 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brpf1B2RRD7 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brpf1B2RRD7 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brpf1B2RRD7 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brpf1B2RRD7 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brpf1B2RRD7 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brpf1B2RRD7 Gm43267-201ENSMUST00000199664 1796 ntBASIC14.67□□□□□ -0.06
Brpf1B2RRD7 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Brpf1B2RRD7 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Brpf1B2RRD7 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Brpf1B2RRD7 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Brpf1B2RRD7 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brpf1B2RRD7 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brpf1B2RRD7 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Brpf1B2RRD7 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Brpf1B2RRD7 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Brpf1B2RRD7 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Gm11893-201ENSMUST00000117829 491 ntBASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Gm12816-201ENSMUST00000118069 1212 ntBASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Gm23153-201ENSMUST00000175323 313 ntBASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Gm28686-201ENSMUST00000187404 609 ntBASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Ighv1-48-201ENSMUST00000191795 294 ntBASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Gm19166-201ENSMUST00000196041 1063 ntBASIC14.66□□□□□ -0.06
Brpf1B2RRD7 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 CT009713.8-202ENSMUST00000224732 385 ntBASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Gm10288-201ENSMUST00000084614 537 ntBASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Gm5879-201ENSMUST00000089501 1209 ntBASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf1B2RRD7 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Gm11663-201ENSMUST00000117888 290 ntBASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Gm8199-201ENSMUST00000121323 823 ntBASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.65□□□□□ -0.06
Brpf1B2RRD7 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Gm6098-201ENSMUST00000180234 330 ntBASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Gm8492-201ENSMUST00000182375 987 ntBASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Gm3671-201ENSMUST00000182463 1007 ntBASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Gm6905-201ENSMUST00000205729 511 ntBASIC14.65□□□□□ -0.06
Brpf1B2RRD7 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms