Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1aA2APX8 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Scn1aA2APX8 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1aA2APX8 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1aA2APX8 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Scn1aA2APX8 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1aA2APX8 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Scn1aA2APX8 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Scn1aA2APX8 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.17□□□□□ -0.46
Scn1aA2APX8 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.16□□□□□ -0.46
Scn1aA2APX8 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Gm37905-201ENSMUST00000195310 341 ntBASIC12.16□□□□□ -0.46
Scn1aA2APX8 Gm45219-201ENSMUST00000205602 465 ntBASIC12.16□□□□□ -0.46
Scn1aA2APX8 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Scn1aA2APX8 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.16□□□□□ -0.46
Scn1aA2APX8 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.16□□□□□ -0.46
Scn1aA2APX8 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Gm12247-201ENSMUST00000117585 670 ntBASIC12.16□□□□□ -0.46
Scn1aA2APX8 Gm15617-201ENSMUST00000118973 771 ntBASIC12.16□□□□□ -0.46
Scn1aA2APX8 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.16□□□□□ -0.46
Scn1aA2APX8 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.16□□□□□ -0.46
Scn1aA2APX8 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Gm27910-201ENSMUST00000185004 107 ntBASIC12.16□□□□□ -0.46
Scn1aA2APX8 Gm37826-201ENSMUST00000195329 322 ntBASIC12.16□□□□□ -0.46
Scn1aA2APX8 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Gm18561-201ENSMUST00000206027 804 ntBASIC12.16□□□□□ -0.46
Scn1aA2APX8 Gm30671-201ENSMUST00000214898 318 ntBASIC12.16□□□□□ -0.46
Scn1aA2APX8 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.16□□□□□ -0.46
Scn1aA2APX8 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.16□□□□□ -0.46
Scn1aA2APX8 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Scn1aA2APX8 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1aA2APX8 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1aA2APX8 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1aA2APX8 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1aA2APX8 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1aA2APX8 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.15□□□□□ -0.46
Scn1aA2APX8 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1aA2APX8 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1aA2APX8 Gm3329-201ENSMUST00000159873 556 ntBASIC12.15□□□□□ -0.46
Scn1aA2APX8 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1aA2APX8 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Scn1aA2APX8 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.15□□□□□ -0.46
Scn1aA2APX8 AC132901.1-201ENSMUST00000224345 508 ntBASIC12.15□□□□□ -0.46
Scn1aA2APX8 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1aA2APX8 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1aA2APX8 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.15□□□□□ -0.46
Scn1aA2APX8 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Scn1aA2APX8 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1aA2APX8 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Scn1aA2APX8 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1aA2APX8 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1aA2APX8 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Scn1aA2APX8 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1aA2APX8 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1aA2APX8 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1aA2APX8 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1aA2APX8 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1aA2APX8 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Scn1aA2APX8 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Scn1aA2APX8 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Scn1aA2APX8 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Scn1aA2APX8 Gm25492-201ENSMUST00000157383 129 ntBASIC12.15□□□□□ -0.47
Scn1aA2APX8 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.15□□□□□ -0.47
Scn1aA2APX8 Gm44008-201ENSMUST00000204345 412 ntBASIC12.15□□□□□ -0.47
Scn1aA2APX8 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Scn1aA2APX8 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Scn1aA2APX8 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.15□□□□□ -0.47
Scn1aA2APX8 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.15□□□□□ -0.47
Scn1aA2APX8 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Scn1aA2APX8 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.15□□□□□ -0.47
Scn1aA2APX8 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Scn1aA2APX8 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms