Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Gm7940-201ENSMUST00000218195 769 ntBASIC11.67□□□□□ -0.54
H2afb2S4R1M3 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Lect2-202ENSMUST00000225183 823 ntBASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
H2afb2S4R1M3 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.66□□□□□ -0.54
H2afb2S4R1M3 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Gm18730-201ENSMUST00000218038 343 ntBASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
H2afb2S4R1M3 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.65□□□□□ -0.54
H2afb2S4R1M3 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
H2afb2S4R1M3 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
H2afb2S4R1M3 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb2S4R1M3 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb2S4R1M3 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb2S4R1M3 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb2S4R1M3 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.65□□□□□ -0.54
H2afb2S4R1M3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.65□□□□□ -0.54
H2afb2S4R1M3 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb2S4R1M3 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb2S4R1M3 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb2S4R1M3 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb2S4R1M3 Gm26047-201ENSMUST00000157308 113 ntBASIC11.65□□□□□ -0.54
H2afb2S4R1M3 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb2S4R1M3 Gm43438-201ENSMUST00000198133 379 ntBASIC11.65□□□□□ -0.54
H2afb2S4R1M3 Gm26047-202ENSMUST00000198840 115 ntBASIC11.65□□□□□ -0.54
H2afb2S4R1M3 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
H2afb2S4R1M3 Gm45186-201ENSMUST00000206874 478 ntBASIC11.65□□□□□ -0.54
H2afb2S4R1M3 Gm18212-201ENSMUST00000211678 889 ntBASIC11.65□□□□□ -0.54
H2afb2S4R1M3 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
H2afb2S4R1M3 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
H2afb2S4R1M3 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms