Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H2afb3S4R1G7 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Gm11930-201ENSMUST00000117788 190 ntBASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Gm11511-201ENSMUST00000118146 540 ntBASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Gm5070-201ENSMUST00000177599 862 ntBASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Gm27046-201ENSMUST00000182160 463 ntBASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Gm9368-201ENSMUST00000219348 831 ntBASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Gm10478-201ENSMUST00000084451 396 ntBASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
H2afb3S4R1G7 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.72
H2afb3S4R1G7 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
H2afb3S4R1G7 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
H2afb3S4R1G7 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.52□□□□□ -0.72
H2afb3S4R1G7 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
H2afb3S4R1G7 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
H2afb3S4R1G7 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
H2afb3S4R1G7 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Gm23270-201ENSMUST00000104055 131 ntBASIC10.52□□□□□ -0.73
H2afb3S4R1G7 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.52□□□□□ -0.73
H2afb3S4R1G7 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.52□□□□□ -0.73
H2afb3S4R1G7 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms