Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Gm24749-201ENSMUST00000157838 343 ntBASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Gm2383-201ENSMUST00000181461 807 ntBASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Gm28071-201ENSMUST00000190355 478 ntBASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Gm18038-201ENSMUST00000197900 485 ntBASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 AC106830.1-201ENSMUST00000228032 1003 ntBASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Gm8385-201ENSMUST00000058999 643 ntBASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Prpf40aQ9R1C7 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Gm8343-201ENSMUST00000182705 994 ntBASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Gm37666-201ENSMUST00000194110 866 ntBASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Gm43184-201ENSMUST00000197247 542 ntBASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Gm4157-201ENSMUST00000211647 679 ntBASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Prpf40aQ9R1C7 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Gm12439-201ENSMUST00000117162 365 ntBASIC12.9□□□□□ -0.34
Prpf40aQ9R1C7 Gm15236-201ENSMUST00000117309 379 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms