Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC13.66□□□□□ -0.22
Scn11aQ9R053 Gm19246-201ENSMUST00000173599 255 ntBASIC13.66□□□□□ -0.22
Scn11aQ9R053 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Gm37782-201ENSMUST00000194879 678 ntBASIC13.66□□□□□ -0.22
Scn11aQ9R053 Gm34379-201ENSMUST00000195036 290 ntBASIC13.66□□□□□ -0.22
Scn11aQ9R053 Ighv1-2-201ENSMUST00000195325 378 ntBASIC13.66□□□□□ -0.22
Scn11aQ9R053 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC13.66□□□□□ -0.22
Scn11aQ9R053 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC13.66□□□□□ -0.22
Scn11aQ9R053 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Scn11aQ9R053 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.65□□□□□ -0.22
Scn11aQ9R053 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Scn11aQ9R053 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Scn11aQ9R053 Gm5740-201ENSMUST00000211003 1857 ntBASIC13.65□□□□□ -0.22
Scn11aQ9R053 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.65□□□□□ -0.22
Scn11aQ9R053 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn11aQ9R053 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn11aQ9R053 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn11aQ9R053 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Scn11aQ9R053 Gm8302-201ENSMUST00000119217 852 ntBASIC13.65□□□□□ -0.22
Scn11aQ9R053 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn11aQ9R053 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn11aQ9R053 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
Scn11aQ9R053 Gm17214-201ENSMUST00000164501 541 ntBASIC13.65□□□□□ -0.22
Scn11aQ9R053 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC13.65□□□□□ -0.22
Scn11aQ9R053 Gm29808-201ENSMUST00000194419 468 ntBASIC13.65□□□□□ -0.22
Scn11aQ9R053 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC13.65□□□□□ -0.22
Scn11aQ9R053 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn11aQ9R053 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn11aQ9R053 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn11aQ9R053 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn11aQ9R053 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.65□□□□□ -0.22
Scn11aQ9R053 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Scn11aQ9R053 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Scn11aQ9R053 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Scn11aQ9R053 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Scn11aQ9R053 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Scn11aQ9R053 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.64□□□□□ -0.23
Scn11aQ9R053 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Gm37651-201ENSMUST00000194679 1494 ntBASIC13.64□□□□□ -0.23
Scn11aQ9R053 Smok4a-201ENSMUST00000074512 1455 ntBASIC13.64□□□□□ -0.23
Scn11aQ9R053 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC13.64□□□□□ -0.23
Scn11aQ9R053 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Gm16030-201ENSMUST00000159098 603 ntBASIC13.64□□□□□ -0.23
Scn11aQ9R053 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC13.64□□□□□ -0.23
Scn11aQ9R053 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.64□□□□□ -0.23
Scn11aQ9R053 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn11aQ9R053 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn11aQ9R053 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Scn11aQ9R053 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.64□□□□□ -0.23
Scn11aQ9R053 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Scn11aQ9R053 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn11aQ9R053 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn11aQ9R053 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Scn11aQ9R053 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn11aQ9R053 Mup-ps29-201ENSMUST00000122281 202 ntBASIC13.63□□□□□ -0.23
Scn11aQ9R053 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn11aQ9R053 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn11aQ9R053 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC13.63□□□□□ -0.23
Scn11aQ9R053 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn11aQ9R053 Mir6973a-201ENSMUST00000183646 78 ntBASIC13.63□□□□□ -0.23
Scn11aQ9R053 Gm42867-201ENSMUST00000202995 469 ntBASIC13.63□□□□□ -0.23
Scn11aQ9R053 Gm18035-201ENSMUST00000211962 589 ntBASIC13.63□□□□□ -0.23
Scn11aQ9R053 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC13.63□□□□□ -0.23
Scn11aQ9R053 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Scn11aQ9R053 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.63□□□□□ -0.23
Scn11aQ9R053 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC13.63□□□□□ -0.23
Scn11aQ9R053 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.63□□□□□ -0.23
Scn11aQ9R053 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Scn11aQ9R053 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn11aQ9R053 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Scn11aQ9R053 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC13.63□□□□□ -0.23
Scn11aQ9R053 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Scn11aQ9R053 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms