Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Olfr128-201ENSMUST00000080231 1050 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim42Q9D2H5 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Gm13736-201ENSMUST00000119272 253 ntBASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Gm15610-201ENSMUST00000120584 195 ntBASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Gm26927-201ENSMUST00000182385 965 ntBASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Gm43002-201ENSMUST00000200310 155 ntBASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Gm9794-201ENSMUST00000202370 423 ntBASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Gm18584-201ENSMUST00000203098 964 ntBASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim42Q9D2H5 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Gm15626-201ENSMUST00000117478 868 ntBASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Gm11918-201ENSMUST00000121660 179 ntBASIC11.74□□□□□ -0.53
Trim42Q9D2H5 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Gm7029-201ENSMUST00000173226 450 ntBASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim42Q9D2H5 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms