Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Gm12501-201ENSMUST00000119163 529 ntBASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Gm2965-201ENSMUST00000198365 343 ntBASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Gm5363-201ENSMUST00000211927 938 ntBASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpa3Q9CQ71 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Gm26047-201ENSMUST00000157308 113 ntBASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Gm8100-201ENSMUST00000182906 988 ntBASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Gm26047-202ENSMUST00000198840 115 ntBASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Gm10288-201ENSMUST00000084614 537 ntBASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Gm21811-201ENSMUST00000096485 930 ntBASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpa3Q9CQ71 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Gm8815-201ENSMUST00000173809 620 ntBASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Gm27552-201ENSMUST00000183351 62 ntBASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Gm27844-201ENSMUST00000183613 62 ntBASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpa3Q9CQ71 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms