Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.4□□□□□ -0.74
ShfQ8CG80 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.4□□□□□ -0.74
ShfQ8CG80 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
ShfQ8CG80 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
ShfQ8CG80 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.4□□□□□ -0.74
ShfQ8CG80 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
ShfQ8CG80 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.4□□□□□ -0.74
ShfQ8CG80 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.4□□□□□ -0.74
ShfQ8CG80 Gm2991-201ENSMUST00000173338 480 ntBASIC10.4□□□□□ -0.74
ShfQ8CG80 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Gm27501-201ENSMUST00000183599 107 ntBASIC10.4□□□□□ -0.74
ShfQ8CG80 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.4□□□□□ -0.74
ShfQ8CG80 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.4□□□□□ -0.74
ShfQ8CG80 Gm38117-201ENSMUST00000194653 939 ntBASIC10.4□□□□□ -0.74
ShfQ8CG80 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.4□□□□□ -0.74
ShfQ8CG80 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.4□□□□□ -0.74
ShfQ8CG80 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.4□□□□□ -0.74
ShfQ8CG80 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
ShfQ8CG80 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
ShfQ8CG80 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
ShfQ8CG80 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.4□□□□□ -0.75
ShfQ8CG80 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
ShfQ8CG80 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
ShfQ8CG80 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
ShfQ8CG80 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.4□□□□□ -0.75
ShfQ8CG80 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
ShfQ8CG80 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
ShfQ8CG80 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
ShfQ8CG80 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
ShfQ8CG80 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
ShfQ8CG80 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
ShfQ8CG80 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
ShfQ8CG80 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.39□□□□□ -0.75
ShfQ8CG80 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
ShfQ8CG80 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.39□□□□□ -0.75
ShfQ8CG80 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
ShfQ8CG80 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
ShfQ8CG80 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
ShfQ8CG80 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
ShfQ8CG80 Gm22133-201ENSMUST00000102082 109 ntBASIC10.39□□□□□ -0.75
ShfQ8CG80 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
ShfQ8CG80 Gm8343-201ENSMUST00000182705 994 ntBASIC10.39□□□□□ -0.75
ShfQ8CG80 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.39□□□□□ -0.75
ShfQ8CG80 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.39□□□□□ -0.75
ShfQ8CG80 AY702102-202ENSMUST00000194651 1173 ntBASIC10.39□□□□□ -0.75
ShfQ8CG80 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
ShfQ8CG80 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.39□□□□□ -0.75
ShfQ8CG80 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
ShfQ8CG80 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.39□□□□□ -0.75
ShfQ8CG80 Gm9368-201ENSMUST00000219348 831 ntBASIC10.39□□□□□ -0.75
ShfQ8CG80 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.39□□□□□ -0.75
ShfQ8CG80 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
ShfQ8CG80 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
ShfQ8CG80 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
ShfQ8CG80 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
ShfQ8CG80 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
ShfQ8CG80 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
ShfQ8CG80 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
ShfQ8CG80 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
ShfQ8CG80 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
ShfQ8CG80 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
ShfQ8CG80 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
ShfQ8CG80 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.39□□□□□ -0.75
ShfQ8CG80 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
ShfQ8CG80 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
ShfQ8CG80 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
ShfQ8CG80 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
ShfQ8CG80 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
ShfQ8CG80 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
ShfQ8CG80 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
ShfQ8CG80 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
ShfQ8CG80 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
ShfQ8CG80 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.38□□□□□ -0.75
ShfQ8CG80 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.38□□□□□ -0.75
ShfQ8CG80 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms