Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Gm5766-201ENSMUST00000160520 1977 ntBASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Gm11960-201ENSMUST00000122068 925 ntBASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Gm9728-201ENSMUST00000200197 1055 ntBASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Gm8712-201ENSMUST00000221090 701 ntBASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Gm10312-201ENSMUST00000078515 489 ntBASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 AC154171.2-201ENSMUST00000225219 2652 ntBASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.87□□□□□ -0.83
Nhlrc3Q8CCH2 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 AC122291.1-201ENSMUST00000228937 5748 ntBASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Gm37954-201ENSMUST00000195400 2071 ntBASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Gm12015-201ENSMUST00000117065 843 ntBASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Rgr-203ENSMUST00000225070 4704 ntBASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC9.86□□□□□ -0.83
Nhlrc3Q8CCH2 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms