Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Gm7857-201ENSMUST00000117957 358 ntBASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Gm5616-201ENSMUST00000165252 384 ntBASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Gm8741-201ENSMUST00000174736 384 ntBASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Gm5706-201ENSMUST00000181525 993 ntBASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Gm29615-201ENSMUST00000185371 697 ntBASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Gm28224-201ENSMUST00000186078 697 ntBASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Gm29001-201ENSMUST00000186177 697 ntBASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Gm28292-201ENSMUST00000186593 697 ntBASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Gm28101-201ENSMUST00000187608 697 ntBASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Gm29076-201ENSMUST00000187689 697 ntBASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Gm28302-201ENSMUST00000187931 697 ntBASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Gm28646-201ENSMUST00000188220 697 ntBASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Gm28205-201ENSMUST00000189177 697 ntBASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Gm29032-201ENSMUST00000189797 697 ntBASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Gm28695-201ENSMUST00000190300 697 ntBASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Gm37448-201ENSMUST00000192795 697 ntBASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC11.34□□□□□ -0.59
Cpsf4Q8BQZ5 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Cpsf4Q8BQZ5 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.59
Cpsf4Q8BQZ5 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cpsf4Q8BQZ5 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Gm15711-201ENSMUST00000118889 535 ntBASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Gm16570-201ENSMUST00000161951 436 ntBASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Gm25732-201ENSMUST00000175168 60 ntBASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Mir6927-201ENSMUST00000184494 71 ntBASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Gm5455-201ENSMUST00000058710 715 ntBASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4Q8BQZ5 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms