Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Gm43179-201ENSMUST00000198797 275 ntBASIC11.31□□□□□ -0.6
Rnf38Q8BI21 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Gm45865-201ENSMUST00000211815 945 ntBASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Gm21769-201ENSMUST00000211922 111 ntBASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Gm30285-201ENSMUST00000214614 422 ntBASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rnf38Q8BI21 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Gm23270-201ENSMUST00000104055 131 ntBASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Gm12015-201ENSMUST00000117065 843 ntBASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Gm5070-201ENSMUST00000177599 862 ntBASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Gm3961-201ENSMUST00000204425 994 ntBASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Cts7-204ENSMUST00000225321 1257 ntBASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rnf38Q8BI21 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rnf38Q8BI21 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms