Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Mir453-201ENSMUST00000104732 82 ntBASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm4294-201ENSMUST00000105169 614 ntBASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm12389-201ENSMUST00000117696 418 ntBASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Mir6953-201ENSMUST00000184745 68 ntBASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm7525-201ENSMUST00000219425 454 ntBASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 AC134869.4-202ENSMUST00000224350 837 ntBASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm1840-201ENSMUST00000051687 1432 ntBASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm23769-201ENSMUST00000104441 121 ntBASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm16459-201ENSMUST00000121443 686 ntBASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm26957-201ENSMUST00000182645 977 ntBASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm8181-201ENSMUST00000062242 669 ntBASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Gm6641-201ENSMUST00000196100 1315 ntBASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ttc28Q80XJ3 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 AC129975.1-201ENSMUST00000224816 592 ntBASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 CT025689.1-201ENSMUST00000225214 283 ntBASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC9.78□□□□□ -0.84
Ttc28Q80XJ3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms