Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Srrm3Q80WV7 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.25□□□□□ -0.45
Srrm3Q80WV7 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Gm20426-201ENSMUST00000173657 440 ntBASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Srrm3Q80WV7 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Gm14130-201ENSMUST00000118417 987 ntBASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Gm11591-201ENSMUST00000120063 702 ntBASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Gm14726-201ENSMUST00000120623 896 ntBASIC12.23□□□□□ -0.45
Srrm3Q80WV7 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Gm25732-201ENSMUST00000175168 60 ntBASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.23□□□□□ -0.45
Srrm3Q80WV7 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Srrm3Q80WV7 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 129.3 ms