Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Gm11667-201ENSMUST00000119828 486 ntBASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Gm14460-201ENSMUST00000121511 639 ntBASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Gm4310-201ENSMUST00000177847 889 ntBASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Gm17831-201ENSMUST00000205579 900 ntBASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Gm45398-201ENSMUST00000210561 165 ntBASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdh8Q7TSK3 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Gm15595-201ENSMUST00000120840 961 ntBASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Gm27438-201ENSMUST00000183480 110 ntBASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh8Q7TSK3 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh8Q7TSK3 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh8Q7TSK3 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh8Q7TSK3 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.55□□□□□ -0.56
Pcdh8Q7TSK3 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.55□□□□□ -0.56
Pcdh8Q7TSK3 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh8Q7TSK3 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh8Q7TSK3 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh8Q7TSK3 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh8Q7TSK3 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh8Q7TSK3 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.55□□□□□ -0.56
Pcdh8Q7TSK3 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Pcdh8Q7TSK3 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh8Q7TSK3 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms