Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm4978-201ENSMUST00000071565 801 ntBASIC11.42□□□□□ -0.58
Ubfd1Q78JW9 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ubfd1Q78JW9 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.42□□□□□ -0.58
Ubfd1Q78JW9 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ubfd1Q78JW9 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Ubfd1Q78JW9 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ubfd1Q78JW9 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Ubfd1Q78JW9 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ubfd1Q78JW9 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ubfd1Q78JW9 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ubfd1Q78JW9 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ubfd1Q78JW9 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ubfd1Q78JW9 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ubfd1Q78JW9 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ubfd1Q78JW9 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ubfd1Q78JW9 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ubfd1Q78JW9 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.42□□□□□ -0.58
Ubfd1Q78JW9 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ubfd1Q78JW9 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Gm6485-201ENSMUST00000160676 439 ntBASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Gm27910-201ENSMUST00000185004 107 ntBASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Gm3551-201ENSMUST00000190750 664 ntBASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Gm37299-201ENSMUST00000193951 826 ntBASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Gm37981-201ENSMUST00000194280 535 ntBASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Snora73b-201ENSMUST00000083419 205 ntBASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.41□□□□□ -0.58
Ubfd1Q78JW9 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Gm12208-201ENSMUST00000122004 163 ntBASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Gm9089-201ENSMUST00000122027 526 ntBASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ubfd1Q78JW9 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms