Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Rnf220Q6PDX6 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Gm38092-201ENSMUST00000195600 653 ntBASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Gm43636-201ENSMUST00000201501 2235 ntBASIC11.07□□□□□ -0.64
Rnf220Q6PDX6 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Gm13492-201ENSMUST00000119772 665 ntBASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Gm12138-201ENSMUST00000122180 951 ntBASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Rmrp-201ENSMUST00000157463 271 ntBASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Gm7029-201ENSMUST00000173226 450 ntBASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Gm26927-201ENSMUST00000182385 965 ntBASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Tmprss3-202ENSMUST00000114549 2872 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Rnf220Q6PDX6 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms