Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Gm43002-201ENSMUST00000200310 155 ntBASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Olfr284-202ENSMUST00000206647 966 ntBASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.71□□□□□ -0.69
Smarcd3Q6P9Z1 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smarcd3Q6P9Z1 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smarcd3Q6P9Z1 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smarcd3Q6P9Z1 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Smarcd3Q6P9Z1 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smarcd3Q6P9Z1 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Smarcd3Q6P9Z1 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Smarcd3Q6P9Z1 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smarcd3Q6P9Z1 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smarcd3Q6P9Z1 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smarcd3Q6P9Z1 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Smarcd3Q6P9Z1 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Gm30285-201ENSMUST00000214614 422 ntBASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Gm9823-201ENSMUST00000051212 327 ntBASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Smarcd3Q6P9Z1 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Smarcd3Q6P9Z1 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms