Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ift88Q61371 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ift88Q61371 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ift88Q61371 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ift88Q61371 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ift88Q61371 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ift88Q61371 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ift88Q61371 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ift88Q61371 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ift88Q61371 Gm26286-201ENSMUST00000104166 134 ntBASIC12.89□□□□□ -0.35
Ift88Q61371 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ift88Q61371 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ift88Q61371 Gm14109-201ENSMUST00000118814 309 ntBASIC12.89□□□□□ -0.35
Ift88Q61371 Gm11660-201ENSMUST00000120955 412 ntBASIC12.89□□□□□ -0.35
Ift88Q61371 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ift88Q61371 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.89□□□□□ -0.35
Ift88Q61371 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ift88Q61371 Gm27046-201ENSMUST00000182160 463 ntBASIC12.89□□□□□ -0.35
Ift88Q61371 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.89□□□□□ -0.35
Ift88Q61371 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.89□□□□□ -0.35
Ift88Q61371 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ift88Q61371 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ift88Q61371 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ift88Q61371 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ift88Q61371 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ift88Q61371 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ift88Q61371 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC12.89□□□□□ -0.35
Ift88Q61371 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ift88Q61371 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.89□□□□□ -0.35
Ift88Q61371 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ift88Q61371 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ift88Q61371 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ift88Q61371 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ift88Q61371 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ift88Q61371 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Ift88Q61371 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ift88Q61371 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ift88Q61371 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ift88Q61371 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ift88Q61371 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ift88Q61371 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Ift88Q61371 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.88□□□□□ -0.35
Ift88Q61371 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ift88Q61371 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ift88Q61371 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ift88Q61371 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Ift88Q61371 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Gm12957-201ENSMUST00000117835 377 ntBASIC12.88□□□□□ -0.35
Ift88Q61371 Gm12241-201ENSMUST00000118330 726 ntBASIC12.88□□□□□ -0.35
Ift88Q61371 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.88□□□□□ -0.35
Ift88Q61371 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.88□□□□□ -0.35
Ift88Q61371 Gm6621-201ENSMUST00000193251 772 ntBASIC12.88□□□□□ -0.35
Ift88Q61371 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.88□□□□□ -0.35
Ift88Q61371 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Ift88Q61371 Gm43962-201ENSMUST00000203898 190 ntBASIC12.88□□□□□ -0.35
Ift88Q61371 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.88□□□□□ -0.35
Ift88Q61371 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.88□□□□□ -0.35
Ift88Q61371 Gm2553-201ENSMUST00000215986 605 ntBASIC12.88□□□□□ -0.35
Ift88Q61371 Gm18065-201ENSMUST00000221395 526 ntBASIC12.88□□□□□ -0.35
Ift88Q61371 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.88□□□□□ -0.35
Ift88Q61371 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ift88Q61371 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ift88Q61371 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ift88Q61371 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ift88Q61371 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.87□□□□□ -0.35
Ift88Q61371 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms